JOIN THE FIGHT AGAINST CORONAVIRUS

Resources for Public Researchers 

Mapping the Sequence and Structure of Coronavirus

 

Datasets: 

  1. https://www.kaggle.com/allen-institute-for-ai/CORD-19-research-challenge

  2. https://cset.georgetown.edu/covid-19-open-research-dataset-cord-19/ 

  3. https://www.whitehouse.gov/briefings-statements/call-action-tech-community-new-machine-readable-covid-19-dataset/ 

COVID-19 GENOME

  1. https://genome.ucsc.edu/cgi-bin/hgTracks?db=wuhCor1&lastVirtModeType=default&lastVirtModeExtraState=&virtModeType=default&virtMode=0&nonVirtPosition=&position=NC_045512v2%3A14951%2D24950&hgsid=799000851_rdDAOY8aECs6ODSPVUt92mNOp7fR  

Genome 3D 

  1. https://www.nature.com/collections/rsxlmsyslk  

  2. https://advances.sciencemag.org/content/6/2/eaay4055 

  3. https://genomebiology.biomedcentral.com/articles/10.1186/s13059-018-1519-9  

 

3D Structure - Covid 19

  1. https://www.drugtargetreview.com/news/57287/3d-visualisation-of-covid-19-surface-released-for-researchers/  

Agent Based Modeling and GIS Simulation of Infectious Disease Outbreaks

  1. https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0208775

 

References:

3d Form: Constructed using 3d models from Protein Data Bank shared by 

 

Tools: 

 

Opensource: http://genometools.org 

 

NVIDIA Parabricks Genome Sequencing and 3D Modeling

 

Visuals Refs:

OPEN SOURCE VENTILATOR PROJECTS:

PUBLIC INFORMATION RESOURCES:

World Health Organization: https://www.who.int/emergencies/diseases/novel-coronavirus-2019

 

INDIA:  https://www.mohfw.gov.in 

United States: http://coronavirus.gov 

Singapore: https://www.moh.gov.sg/covid-19  

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